U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    KRR1 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821994, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    KRR1 family protein
    Primary source
    TAIR:AT3G24080
    Locus tag
    AT3G24080
    See related
    Araport:AT3G24080
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (8694867..8697142, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Plant self-incompatibility protein S1 family Neighboring gene Zinc knuckle (CCHC-type) family protein Neighboring gene putative glucosamine-fructose-6-phosphate aminotransferase Neighboring gene Paired amphipathic helix (PAH2) superfamily protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001125215.2
    NM_001338667.1
    NM_113313.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    KRR1 family protein
    NP_001118687.1
    • KRR1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: KRR1 interacting protein 1, subgroup (InterPro:IPR007851), KRR1 interacting protein 1 (InterPro:IPR018034); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_189050.2
    • KRR1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: KRR1 interacting protein 1, subgroup (InterPro:IPR007851), KRR1 interacting protein 1 (InterPro:IPR018034); Has 58267 Blast hits to 33525 proteins in 1602 species: Archae - 251; Bacteria - 4220; Metazoa - 24830; Fungi - 6847; Plants - 2500; Viruses - 358; Other Eukaryotes - 19261 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      8694867..8697142 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338666.1 → NP_001326131.1  KRR1 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LNC2, A0A5S9XGQ8

    2. NM_113313.4 → NP_189050.2  KRR1 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189050.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FA70, F4J5D3
      Conserved Domains (2) summary
      pfam05178
      Location:309 → 402
      Kri1; KRI1-like family
      pfam12936
      Location:480 → 566
      Kri1_C; KRI1-like family C-terminal

    3. NM_001338667.1 → NP_001326130.1  KRR1 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LNC1, A0A5S9XGQ8

    4. NM_001125215.2 → NP_001118687.1  KRR1 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118687.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XGQ8, B3H494
      Conserved Domains (2) summary
      pfam05178
      Location:309 → 402
      Kri1; KRI1-like family
      pfam12936
      Location:480 → 566
      Kri1_C; KRI1-like family C-terminal
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.