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    Plant protein 1589 of unknown function [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822539, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Plant protein 1589 of unknown function
    Primary source
    TAIR:AT3G28990
    Locus tag
    AT3G28990
    See related
    Araport:AT3G28990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (11002351..11003072, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene mediator of RNA polymerase II transcription subunit-like protein, putative (DUF1216) Neighboring gene miscRNA Neighboring gene Calcium-binding EF-hand family protein Neighboring gene Biotin/lipoate A/B protein ligase family Neighboring gene myb domain protein 110

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PSEUDO-ETIOLATION IN LIGHT proteins reduce greening by binding GLK transcription factors. Han Y, et al. Plant Physiol, 2024 Feb 29. PMID 38051979
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in positive regulation of chlorophyll biosynthetic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Plant protein 1589 of unknown function
    NP_189541.1
    • Plant protein 1589 of unknown function; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: Plant protein 1589 of unknown function (TAIR:AT3G55240.1); Has 211 Blast hits to 211 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      11002351..11003072 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113820.1 → NP_189541.1  Plant protein 1589 of unknown function [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189541.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XH36, A0A654FGU8, Q9MBG6
      Conserved Domains (1) summary
      TIGR01589
      Location:10 → 66
      A_thal_3526; uncharacterized plant-specific domain TIGR01589
    Nucleotide Protein
    Heading Accession and Version

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