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    LBD26 LOB domain-containing protein 26 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822418, updated on 18-Sep-2024

    Summary

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    Official Symbol
    LBD26
    Official Full Name
    LOB domain-containing protein 26
    Primary source
    TAIR:AT3G27940
    Locus tag
    AT3G27940
    See related
    Araport:AT3G27940
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    LOB domain-containing protein 26
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    Genomic context

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    See LBD26 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (10373251..10376480)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene DegP protease 1 Neighboring gene beta-galactosidase Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ZmMS1/ZmLBD30-orchestrated transcriptional regulatory networks precisely control pollen exine development. Hou Q, et al. Mol Plant, 2023 Aug 7. PMID 37501369
    2. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001338923.1
    NM_001338924.1
    NM_113711.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription repressor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    LOB domain-containing protein 26
    NP_189433.1
    • LOB domain-containing protein 26 (LBD26); INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 10 (TAIR:AT2G23660.2); Has 711 Blast hits to 709 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 711; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      10373251..10376480
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113711.3 → NP_189433.1  LOB domain-containing protein 26 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189433.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A1I9LN91, B7XG82, Q9LIJ0
      UniProtKB/TrEMBL
      A0A178VCA6, A0A5S9XGC0, A0A654FBB8
      Conserved Domains (1) summary
      pfam03195
      Location:6 → 100
      LOB; Lateral organ boundaries (LOB) domain

    2. NM_001338923.1 → NP_001326100.1  LOB domain-containing protein 26 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A1I9LN91, B7XG82, Q9LIJ0
      UniProtKB/TrEMBL
      A0A178VCA6, A0A5S9XGC0, A0A654FBB8
      Conserved Domains (1) summary
      pfam03195
      Location:6 → 100
      LOB; Lateral organ boundaries (LOB) domain

    3. NM_001338924.1 → NP_001326101.1  LOB domain-containing protein 26 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A1I9LN91, B7XG82, Q9LIJ0
      UniProtKB/TrEMBL
      A0A178VCA6, A0A5S9XGC0, A0A654FBB8
      Conserved Domains (1) summary
      pfam03195
      Location:6 → 100
      LOB; Lateral organ boundaries (LOB) domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LIJ0.2

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