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    JAL31 jacalin-related lectin 31 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820891, updated on 18-Sep-2024

    Summary

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    Official Symbol
    JAL31
    Official Full Name
    jacalin-related lectin 31
    Primary source
    TAIR:AT3G16430
    Locus tag
    AT3G16430
    See related
    Araport:AT3G16430
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    jacalin-related lectin 31; PBPII
    Summary
    Encodes a protein that increases the beta-glucosidase activities of three scopolin glucosidases in vitro.
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    Genomic context

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    See JAL31 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (5581568..5583258)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene PYK10-binding protein 1 Neighboring gene uncharacterized protein Neighboring gene myrosinase-binding protein-like protein-300B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The proteome landscape of the root cap reveals a role for the jacalin-associated lectin JAL10 in the salt-induced endoplasmic reticulum stress pathway. Das KK, et al. Plant Commun, 2023 Nov 13. PMID 37789617, Free PMC Article
    2. Proteomic survey of copper-binding proteins in Arabidopsis roots by immobilized metal affinity chromatography and mass spectrometry. Kung CC, et al. Proteomics, 2006 May. PMID 16526091
    3. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    4. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_112514.3
    NM_180264.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables copper ion binding HDA PubMed 
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in response to salt stress IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    jacalin-related lectin 31
    NP_188264.1
    • jacalin-related lectin 31 (JAL31); FUNCTIONS IN: copper ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: PYK10-binding protein 1 (TAIR:AT3G16420.3); Has 1533 Blast hits to 750 proteins in 40 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 1528; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    NP_850595.1
    • jacalin-related lectin 31 (JAL31); FUNCTIONS IN: copper ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: PYK10-binding protein 1 (TAIR:AT3G16420.3); Has 1533 Blast hits to 750 proteins in 40 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 1528; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5581568..5583258
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112514.3 → NP_188264.1  jacalin-related lectin 31 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188264.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O04313
      UniProtKB/TrEMBL
      A0A178VEL7, A0A5S9XD79
      Conserved Domains (1) summary
      pfam01419
      Location:161 → 293
      Jacalin; Jacalin-like lectin domain

    2. NM_180264.3 → NP_850595.1  jacalin-related lectin 31 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850595.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O04313
      UniProtKB/TrEMBL
      A0A178VEL7, A0A5S9XD79
      Conserved Domains (1) summary
      pfam01419
      Location:161 → 293
      Jacalin; Jacalin-like lectin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O04313.1

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