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    ATP-dependent helicase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823000, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ATP-dependent helicase family protein
    Primary source
    TAIR:AT3G32280
    Locus tag
    AT3G32280
    See related
    Araport:AT3G32280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (13233832..13240154)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in gene silencing by siRNA-directed DNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ATP-dependent helicase family protein
    NP_189770.1
    • ATP-dependent helicase family protein; FUNCTIONS IN: DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: ATP-dependent helicase family protein (TAIR:AT3G31900.1); Has 494 Blast hits to 443 proteins in 130 species: Archae - 0; Bacteria - 18; Metazoa - 129; Fungi - 101; Plants - 214; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      13233832..13240154
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114050.1 → NP_189770.1  ATP-dependent helicase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189770.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XH71, F4JA84
      Conserved Domains (1) summary
      pfam10536
      Location:1 → 58
      PMD; Plant mobile domain
    Nucleotide Protein
    Heading Accession and Version

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