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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820636, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT3G14190
    Locus tag
    AT3G14190
    See related
    Araport:AT3G14190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CMR1; COPPER MODIFIED RESISTANCE 1; PANS1; PATRONUS 1
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (4710483..4712569)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene sequence-specific DNA binding transcription factor Neighboring gene ncRNA Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene Phosphoinositide phosphatase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis COPPER MODIFIED RESISTANCE1/PATRONUS1 is essential for growth adaptation to stress and required for mitotic onset control. Juraniec M, et al. New Phytol, 2016 Jan. PMID 26261921
    2. PATRONUS1 is expressed in meiotic prophase I to regulate centromeric cohesion in Arabidopsis and shows synthetic lethality with OSD1. Singh DK, et al. BMC Plant Biol, 2015 Aug 14. PMID 26272661, Free PMC Article
    3. SHUGOSHINs and PATRONUS protect meiotic centromere cohesion in Arabidopsis thaliana. Zamariola L, et al. Plant J, 2014 Mar. PMID 24506176
    4. Centromeric cohesion is protected twice at meiosis, by SHUGOSHINs at anaphase I and by PATRONUS at interkinesis. Cromer L, et al. Curr Biol, 2013 Nov 4. PMID 24206843
    5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Likely, CMR1/PANS1 coordinates mitotic cell cycle progression by acting as an anaphase-promoting complex/cyclosome (APC/C) inhibitor and plays a key role in growth adaptation to stress.
      Title: Arabidopsis COPPER MODIFIED RESISTANCE1/PATRONUS1 is essential for growth adaptation to stress and required for mitotic onset control.
    2. PANS1 is expressed mainly in meiosis I where it has an important function; PANS1 and OSD1 are part of a network linking centromere cohesion and cell cycle progression through control of Anaphase Promoting Complex/Cyclosome (APC/C) activity.
      Title: PATRONUS1 is expressed in meiotic prophase I to regulate centromeric cohesion in Arabidopsis and shows synthetic lethality with OSD1.
    3. preserves ploidy stability during meiosis and mitosis
      Title: SHUGOSHINs and PATRONUS protect meiotic centromere cohesion in Arabidopsis thaliana.
    4. Study shows that both Arabidopsis SHUGOSHINs paralogs, At3g10440 and At5g04320, are required for complete protection of centromeric cohesins during meiosis I, without apparent somatic function, and (2) identified PATRONUS (PANS1, At3g14190), a novel protein required for protection of meiotic centromeric cohesion.
      Title: Centromeric cohesion is protected twice at meiosis, by SHUGOSHINs at anaphase I and by PATRONUS at interkinesis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001338112.1
    NM_112275.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within positive regulation of maintenance of meiotic sister chromatid cohesion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of mitotic cell cycle IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_566480.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12360.1); Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4710483..4712569
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112275.3 → NP_566480.1  uncharacterized protein AT3G14190 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566480.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84WK8, Q8LFX6, Q9LJG6
      UniProtKB/TrEMBL
      A0A178V7L5, A0A5S9XC79, A0A654F717

    2. NM_001338112.1 → NP_001327476.1  uncharacterized protein AT3G14190 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84WK8, Q8LFX6, Q9LJG6
      UniProtKB/TrEMBL
      A0A178V7L5, A0A5S9XC79, A0A654F717
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LJG6.1

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