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    2-oxoglutarate-dependent dioxygenase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820631, updated on 18-Sep-2024

    Summary

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    Official Full Name
    2-oxoglutarate-dependent dioxygenase family protein
    Primary source
    TAIR:AT3G14140
    Locus tag
    AT3G14140
    See related
    Araport:AT3G14140
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (4688546..4690404)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene nuclear pore complex protein Neighboring gene Aldolase-type TIM barrel family protein Neighboring gene ncRNA Neighboring gene Aldolase-type TIM barrel family protein Neighboring gene 2-oxoglutarate-dependent dioxygenase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    2-oxoglutarate-dependent dioxygenase family protein
    NP_188030.2
    • 2-oxoglutarate-dependent dioxygenase family protein; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate-dependent dioxygenase family protein (TAIR:AT3G14160.1); Has 1214 Blast hits to 1208 proteins in 570 species: Archae - 0; Bacteria - 917; Metazoa - 90; Fungi - 24; Plants - 86; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4688546..4690404
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112270.2 → NP_188030.2  2-oxoglutarate-dependent dioxygenase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188030.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JFR7, Q9LJH4
      UniProtKB/TrEMBL
      A0A654F714
      Conserved Domains (1) summary
      pfam13532
      Location:241 → 462
      2OG-FeII_Oxy_2; 2OG-Fe(II) oxygenase superfamily
    Nucleotide Protein
    Heading Accession and Version

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