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    PARC6 plastid division protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821452, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PARC6
    Official Full Name
    plastid division protein
    Primary source
    TAIR:AT3G19180
    Locus tag
    AT3G19180
    See related
    Araport:AT3G19180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    A. THALIANA CHLOROPLAST DIVISION SITE POSITIONING 1; ARC6H; ATCDP1; CDP1; CHLOROPLAST DIVISION SITE POSITIONING 1; paralog of ARC6
    Summary
    Encodes a chloroplast division factor located in the plastid inner envelope with its N-terminus exposed to the stroma. PARC6 influences FtsZ assembly and is required for recruitment of PDV1 during chloroplast division.
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    Genomic context

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    See PARC6 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    12
    Sequence:
    Chromosome: 3; NC_003074.8 (6632637..6637292)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ATP/ADP isopentenyltransferase Neighboring gene presequence protease 1 Neighboring gene AP2/B3-like transcriptional factor family protein Neighboring gene autophagy 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. CDP1, a novel component of chloroplast division site positioning system in Arabidopsis. Zhang M, et al. Cell Res, 2009 Jul. PMID 19564892
    2. ARC6 is a J-domain plastid division protein and an evolutionary descendant of the cyanobacterial cell division protein Ftn2. Vitha S, et al. Plant Cell, 2003 Aug. PMID 12897262, Free PMC Article
    3. Isolation and analysis of a stromule-overproducing Arabidopsis mutant suggest the role of PARC6 in plastid morphology maintenance in the leaf epidermis. Itoh RD, et al. Physiol Plant, 2018 Apr. PMID 28984364
    4. PARC6, a novel chloroplast division factor, influences FtsZ assembly and is required for recruitment of PDV1 during chloroplast division in Arabidopsis. Glynn JM, et al. Plant J, 2009 Sep. PMID 19453460
    5. Roles of Arabidopsis PARC6 in Coordination of the Chloroplast Division Complex and Negative Regulation of FtsZ Assembly. Zhang M, et al. Plant Physiol, 2016 Jan. PMID 26527658, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. PARC6 role in coordination of the chloroplast division complex and negative regulation of FtsZ assembly.
      Title: Roles of Arabidopsis PARC6 in Coordination of the Chloroplast Division Complex and Negative Regulation of FtsZ Assembly.
    2. Chloroplast division site positioning 1 (AtCDP1) is a novel chloroplast division protein involved in chloroplast division site placement in Arabidopsis. [CDP1]
      Title: CDP1, a novel component of chloroplast division site positioning system in Arabidopsis.
    3. PARC6 plays a role in coordinating the internal and external components of the chloroplast division complex and may function as an antagonistic regulator of Z-ring dynamics.
      Title: PARC6, a novel chloroplast division factor, influences FtsZ assembly and is required for recruitment of PDV1 during chloroplast division in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001035648.1
    NM_112805.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chloroplast fission IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within chloroplast fission IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in chloroplast fission IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in chloroplast organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within plastid fission IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plastid inner membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    plastid division protein
    NP_001030725.1
    • paralog of ARC6 (PARC6); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G42480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_188549.2
    • paralog of ARC6 (PARC6); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G42480.1); Has 266 Blast hits to 205 proteins in 69 species: Archae - 0; Bacteria - 132; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6632637..6637292
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112805.5 → NP_188549.2  plastid division protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188549.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2V3U5, Q8VY16, Q9LJL2
      UniProtKB/TrEMBL
      A0A178VBN5, A0A5S9XDK6
      Conserved Domains (1) summary
      pfam13355
      Location:693 → 811
      DUF4101; Protein of unknown function (DUF4101)

    2. NM_001035648.1 → NP_001030725.1  plastid division protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030725.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XDK6
      Conserved Domains (1) summary
      pfam13355
      Location:693 → 730
      DUF4101; Protein of unknown function (DUF4101)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8VY16.2

    Gene LinkOut

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