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    ETP1 EIN2 targeting protein1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821431, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ETP1
    Official Full Name
    EIN2 targeting protein1
    Primary source
    TAIR:AT3G18980
    Locus tag
    AT3G18980
    See related
    Araport:AT3G18980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    EIN2 targeting protein1
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    Genomic context

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    See ETP1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (6546200..6548092)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene AP2/B3-like transcriptional factor family protein Neighboring gene mitochondrial editing factor 20 Neighboring gene AP2/B3-like transcriptional factor family protein Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Interplay between ethylene, ETP1/ETP2 F-box proteins, and degradation of EIN2 triggers ethylene responses in Arabidopsis. Qiao H, et al. Genes Dev, 2009 Feb 15. PMID 19196655, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001084716.2
    NM_112784.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    EIN2 targeting protein1
    NP_001078185.1
    • EIN2 targeting protein1 (ETP1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: EIN2 targeting protein2 (TAIR:AT3G18910.1); Has 1009 Blast hits to 963 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1009; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_566622.1
    • EIN2 targeting protein1 (ETP1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: EIN2 targeting protein2 (TAIR:AT3G18910.1); Has 1009 Blast hits to 963 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1009; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6546200..6548092
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112784.3 → NP_566622.1  EIN2 targeting protein1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566622.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LB99, Q9LJ68
      UniProtKB/TrEMBL
      A0A178V4Q5, A0A5S9XDI6, A0A654FAG4
      Conserved Domains (2) summary
      pfam07734
      Location:214 → 398
      FBA_1; F-box associated
      pfam00646
      Location:1 → 45
      F-box; F-box domain

    2. NM_001084716.2 → NP_001078185.1  EIN2 targeting protein1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078185.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LB99, Q9LJ68
      UniProtKB/TrEMBL
      A0A178V4Q5, A0A5S9XDI6, A0A654FAG4
      Conserved Domains (2) summary
      pfam07734
      Location:214 → 398
      FBA_1; F-box associated
      pfam00646
      Location:1 → 45
      F-box; F-box domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LJ68.1

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