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    agamous-like MADS-box protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818742, updated on 18-Sep-2024

    Summary

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    Official Full Name
    agamous-like MADS-box protein
    Primary source
    TAIR:AT2G41440
    Locus tag
    AT2G41440
    See related
    Araport:AT2G41440
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T26J13.3; T26J13_3
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    11
    Sequence:
    Chromosome: 2; NC_003071.7 (17271143..17274394)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene proline-rich family protein Neighboring gene dehydration-induced protein (ERD15) Neighboring gene agamous-like MADS-box protein Neighboring gene N-acetyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001336907.1
    NM_001336908.1
    NM_001336909.1
    NM_129707.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    agamous-like MADS-box protein
    NP_001318402.1
    • unknown protein; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_181675.2
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      17271143..17274394
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129707.3 → NP_181675.2  agamous-like MADS-box protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181675.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VQ88, A0A384KYK8, F4IK16

    2. NM_001336908.1 → NP_001323516.1  agamous-like MADS-box protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VQ88, A0A384KYK8, F4IK16

    3. NM_001336909.1 → NP_001323517.1  agamous-like MADS-box protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VQ88, A0A384KYK8, F4IK16

    4. NM_001336907.1 → NP_001318402.1  agamous-like MADS-box protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q56YG1
    Nucleotide Protein
    Heading Accession and Version

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