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    Histone H3 K4-specific methyltransferase SET7/9 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818084, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Histone H3 K4-specific methyltransferase SET7/9 family protein
    Primary source
    TAIR:AT2G35170
    Locus tag
    AT2G35170
    See related
    Araport:AT2G35170
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T4C15.16; T4C15_16
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (14827360..14829844)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene SU(VAR)3-9 homolog 5 Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene Putative plant snare 11

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_129071.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Histone H3 K4-specific methyltransferase SET7/9 family protein
    NP_565799.1
    • Histone H3 K4-specific methyltransferase SET7/9 family protein; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: Histone H3 K4-specific methyltransferase SET7/9 family protein (TAIR:AT4G17080.1); Has 27308 Blast hits to 6490 proteins in 565 species: Archae - 0; Bacteria - 4017; Metazoa - 4394; Fungi - 189; Plants - 2649; Viruses - 0; Other Eukaryotes - 16059 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14827360..14829844
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129071.3 → NP_565799.1  Histone H3 K4-specific methyltransferase SET7/9 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565799.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VQ90, A0A5S9X483, A0A654EYZ6, O82174
      Conserved Domains (1) summary
      PLN03185
      Location:213 → 384
      PLN03185; phosphatidylinositol phosphate kinase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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