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    TRM13 Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819198, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TRM13
    Official Full Name
    Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein
    Primary source
    TAIR:AT2G45900
    Locus tag
    AT2G45900
    See related
    Araport:AT2G45900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4I18.12; TON1 Recruiting Motif 13
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    Genomic context

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    See TRM13 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Sequence:
    Chromosome: 2; NC_003071.7 (18885751..18889178, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene beta-amylase 7 Neighboring gene RHO guanyl-nucleotide exchange factor 4 Neighboring gene U-box domain-containing protein kinase family protein Neighboring gene U-box domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global analysis of della direct targets in early gibberellin signaling in Arabidopsis. Zentella R, et al. Plant Cell, 2007 Oct. PMID 17933900, Free PMC Article
    2. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001337158.1
    NM_001337159.1
    NM_130153.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to gibberellin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein
    NP_001318431.1
    • Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related; BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT3G61380.1); Has 396 Blast hits to 374 proteins in 94 species: Archae - 0; Bacteria - 31; Metazoa - 55; Fungi - 42; Plants - 167; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18885751..18889178 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337158.1 → NP_001318431.1  Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VUV9, A0A384LCE0, O80829
      Conserved Domains (1) summary
      pfam14309
      Location:557 → 701
      DUF4378; Domain of unknown function (DUF4378)

    2. NM_130153.2 → NP_182114.1  Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182114.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VUV9, A0A384LCE0, O80829
      Conserved Domains (1) summary
      pfam14309
      Location:557 → 701
      DUF4378; Domain of unknown function (DUF4378)

    3. NM_001337159.1 → NP_001324175.1  Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VUV9, A0A384LCE0, O80829
      Conserved Domains (1) summary
      pfam14309
      Location:557 → 701
      DUF4378; Domain of unknown function (DUF4378)
    Nucleotide Protein
    Heading Accession and Version

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