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    hAT family dimerization domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 815208, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hAT family dimerization domain-containing protein
    Primary source
    TAIR:AT2G06500
    Locus tag
    AT2G06500
    See related
    Araport:AT2G06500
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T12H3.5; T12H3_5
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (2580718..2583223, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene PttA/En/Spm family plant transposase Neighboring gene pseudo Neighboring gene replication protein A 1A Neighboring gene photosystem II subunit X

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hAT family dimerization domain-containing protein
    NP_178689.1
    • hAT family dimerisation domain; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: General transcription factor 2-related zinc finger protein (TAIR:AT1G35150.1); Has 1024 Blast hits to 763 proteins in 58 species: Archae - 2; Bacteria - 6; Metazoa - 608; Fungi - 2; Plants - 377; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      2580718..2583223 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126647.1 → NP_178689.1  hAT family dimerization domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178689.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654ES81, Q9SKI5
      Conserved Domains (2) summary
      pfam05699
      Location:469 → 557
      Dimer_Tnp_hAT; hAT family C-terminal dimerization region
      pfam14291
      Location:84 → 310
      DUF4371; Domain of unknown function (DUF4371)
    Nucleotide Protein
    Heading Accession and Version

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