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    Putative serine esterase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837532, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Putative serine esterase family protein
    Primary source
    TAIR:AT1G09980
    Locus tag
    AT1G09980
    See related
    Araport:AT1G09980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T27I1.1
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    15
    Sequence:
    Chromosome: 1; NC_003070.9 (3256189..3261741, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Leucine-rich receptor-like protein kinase family protein Neighboring gene DNA repair DEAD helicase RAD3/XP-D subfamily protein Neighboring gene Ribonuclease H-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Toward an interaction map of the two-component signaling pathway of Arabidopsis thaliana. Dortay H, et al. J Proteome Res, 2008 Sep. PMID 18642946
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001084032.2
    NM_100872.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Putative serine esterase family protein
    NP_001077501.1
    • Putative serine esterase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3657 (InterPro:IPR022122), Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: Putative serine esterase family protein (TAIR:AT1G58350.2); Has 481 Blast hits to 386 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 284; Fungi - 2; Plants - 83; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).
    NP_172469.2
    • Putative serine esterase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3657 (InterPro:IPR022122), Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: Putative serine esterase family protein (TAIR:AT1G58350.2); Has 480 Blast hits to 383 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 283; Fungi - 2; Plants - 87; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3256189..3261741 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331872.1 → NP_001320302.1  Putative serine esterase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WN21, A0A5S9TJK3, Q0WL16, Q8RXV4
      Conserved Domains (2) summary
      pfam05057
      Location:519 → 718
      DUF676; Putative serine esterase (DUF676)
      pfam12394
      Location:147 → 208
      DUF3657; Protein FAM135

    2. NM_100872.6 → NP_172469.2  Putative serine esterase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172469.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WN21, A0A5S9TJK3, Q0WL16, Q8RXV4
      Conserved Domains (2) summary
      pfam05057
      Location:519 → 718
      DUF676; Putative serine esterase (DUF676)
      pfam12394
      Location:147 → 208
      DUF3657; Protein FAM135

    3. NM_001084032.2 → NP_001077501.1  Putative serine esterase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077501.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8MRZ8, Q0WL16
      Conserved Domains (2) summary
      pfam05057
      Location:518 → 717
      DUF676; Putative serine esterase (DUF676)
      pfam12394
      Location:147 → 208
      DUF3657; Protein of unknown function (DUF3657)
    Nucleotide Protein
    Heading Accession and Version

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