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    F-box only protein (DUF295) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 815027, updated on 18-Sep-2024

    Summary

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    Official Full Name
    F-box only protein (DUF295)
    Primary source
    TAIR:AT2G04830
    Locus tag
    AT2G04830
    See related
    Araport:AT2G04830
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28I8.13; F28I8_13
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (1695355..1695856)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene F-box only protein (DUF295) Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene F-box only protein (DUF295) Neighboring gene threonyl-tRNA synthetase, putative / threonine-tRNA ligase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_126514.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    F-box only protein (DUF295)
    NP_178560.1
    • Protein of unknown function (DUF295); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT2G04840.1); Has 68 Blast hits to 68 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      1695355..1695856
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126514.2 → NP_178560.1  F-box only protein (DUF295) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178560.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WX58, A0A654ERY0, Q4PSV9, Q9SJ76
      Conserved Domains (1) summary
      pfam03478
      Location:9 → 73
      DUF295; Protein of unknown function (DUF295)
    Nucleotide Protein
    Heading Accession and Version

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