U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RLP3 receptor like protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838296, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RLP3
    Official Full Name
    receptor like protein 3
    Primary source
    TAIR:AT1G17250
    Locus tag
    AT1G17250
    See related
    Araport:AT1G17250
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtRLP3; F20D23.5; F20D23_5; receptor like protein 3; RESISTANCE TO FUSARIUM OXYSPORUM 2; RFO2
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RLP3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (5901169..5903439, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ROTUNDIFOLIA like 11 Neighboring gene receptor like protein 2 Neighboring gene ncRNA Neighboring gene autoinhibited H[+]-ATPase isoform 10 Neighboring gene O-fucosyltransferase family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Arabidopsis thaliana resistance to fusarium oxysporum 2 implicates tyrosine-sulfated peptide signaling in susceptibility and resistance to root infection. Shen Y, et al. PLoS Genet, 2013 May. PMID 23717215, Free PMC Article
    2. RESISTANCE TO FUSARIUM OXYSPORUM 1, a dominant Arabidopsis disease-resistance gene, is not race specific. Diener AC, et al. Genetics, 2005 Sep. PMID 15965251, Free PMC Article
    3. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_101586.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in defense response to fungus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in defense response to fungus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within innate immune response IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in meristem maintenance ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within response to fungus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within signal transduction IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    receptor like protein 3
    NP_173168.1
    • receptor like protein 3 (RLP3); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 2 (TAIR:AT1G17240.1); Has 81484 Blast hits to 24794 proteins in 958 species: Archae - 37; Bacteria - 4331; Metazoa - 15807; Fungi - 760; Plants - 53957; Viruses - 2; Other Eukaryotes - 6590 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5901169..5903439 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101586.1 → NP_173168.1  receptor like protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173168.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WVG4, Q9SHI4
      UniProtKB/TrEMBL
      A0A178WD64, A0A5S9UUV8
      Conserved Domains (2) summary
      PLN00113
      Location:37 → 709
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:122 → 146
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SHI4.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools