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    cotton fiber protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818026, updated on 18-Sep-2024

    Summary

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    Official Full Name
    cotton fiber protein
    Primary source
    TAIR:AT2G34610
    Locus tag
    AT2G34610
    See related
    Araport:AT2G34610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T31E10.5; T31E10_5
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (14575392..14576527)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Transketolase family protein Neighboring gene jasmonate-zim-domain protein 7 Neighboring gene Mitochondrial transcription termination factor family protein Neighboring gene geranyl diphosphate synthase 1 Neighboring gene plastid transcriptionally active 12

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_179902.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cotton fiber protein
    NP_850233.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits to 279 proteins in 74 species: Archae - 0; Bacteria - 7; Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14575392..14576527
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179902.2 → NP_850233.1  cotton fiber protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850233.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VWX9, Q8VYN4
    Nucleotide Protein
    Heading Accession and Version

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