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    ubiquitin carboxyl-terminal hydrolase-like protein, putative (Protein with domains of unknown function DUF627 and DUF632) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817985, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ubiquitin carboxyl-terminal hydrolase-like protein, putative (Protein with domains of unknown function DUF627 and DUF632)
    Primary source
    TAIR:AT2G34240
    Locus tag
    AT2G34240
    See related
    Araport:AT2G34240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13P17.8; F13P17_8
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (14459157..14461802)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ubiquitin carboxyl-terminal hydrolase-like protein, putative (DUF627 and DUF629) Neighboring gene uncharacterized protein Neighboring gene SecY protein transport family protein Neighboring gene transducin family protein / WD-40 repeat family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_128975.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ubiquitin carboxyl-terminal hydrolase-like protein, putative (Protein with domains of unknown function DUF627 and DUF632)
    NP_180971.2
    • Protein with domains of unknown function DUF627 and DUF632; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Protein with domains of unknown function (DUF627 and DUF629) (TAIR:AT2G34220.1); Has 93 Blast hits to 93 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14459157..14461802
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128975.2 → NP_180971.2  ubiquitin carboxyl-terminal hydrolase-like protein, putative (Protein with domains of unknown function DUF627 and DUF632) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180971.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X3R4, A0A654EYR5, F4IGX9
      Conserved Domains (2) summary
      pfam04780
      Location:196 → 629
      DUF629; Protein of unknown function (DUF629)
      pfam04781
      Location:24 → 138
      DUF627; Protein of unknown function (DUF627)
    Nucleotide Protein
    Heading Accession and Version

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