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    HSP40/DnaJ peptide-binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837645, updated on 18-Sep-2024

    Summary

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    Official Full Name
    HSP40/DnaJ peptide-binding protein
    Primary source
    TAIR:AT1G11040
    Locus tag
    AT1G11040
    See related
    Araport:AT1G11040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T19D16.7; T19D16_7
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (3678981..3681032, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene tRNA-Met Neighboring gene RING/FYVE/PHD zinc finger superfamily protein Neighboring gene tRNA-Arg Neighboring gene Protein kinase superfamily protein Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene WAPL (Wings apart-like protein regulation of heterochromatin) protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    • At1g11050_Arabidopsis_lyrata_ssp._lyrata_CAN1 (e-PCR)
    • At1g11050_Arabidopsis_lyrata_ssp._petraea_GER1 (e-PCR)

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    HSP40/DnaJ peptide-binding protein
    NP_172571.1
    • HSP40/DnaJ peptide-binding protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: HSP40/DnaJ peptide-binding protein (TAIR:AT1G44160.1); Has 19507 Blast hits to 13358 proteins in 2831 species: Archae - 102; Bacteria - 8184; Metazoa - 2012; Fungi - 1146; Plants - 786; Viruses - 38; Other Eukaryotes - 7239 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3678981..3681032 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100977.2 → NP_172571.1  HSP40/DnaJ peptide-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172571.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W1Y6, A0A5S9TQV0, O04087
      Conserved Domains (1) summary
      cd10747
      Location:259 → 420
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
    Nucleotide Protein
    Heading Accession and Version

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