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    sulfatase and phosphatidylinositolglycan class N domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821231, updated on 18-Sep-2024

    Summary

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    Official Full Name
    sulfatase and phosphatidylinositolglycan class N domain-containing protein
    Primary source
    TAIR:AT3G01380
    Locus tag
    AT3G01380
    See related
    Araport:AT3G01380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T13O15.2; T13O15_2
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    18
    Sequence:
    Chromosome: 3; NC_003074.8 (143880..149880, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene plant viral-response family protein (DUF716) Neighboring gene ncRNA Neighboring gene CRM family member 2 Neighboring gene vacuolar membrane ATPase 10 Neighboring gene ARM repeat superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article
    2. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    NM_001337331.1

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in GPI anchor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    sulfatase and phosphatidylinositolglycan class N domain-containing protein
    NP_001319441.1
    • transferases;sulfuric ester hydrolases;catalytics;transferases; FUNCTIONS IN: sulfuric ester hydrolase activity, transferase activity, catalytic activity; INVOLVED IN: GPI anchor biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI ethanolamine phosphate transferase 1, C-terminal (InterPro:IPR017852), Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), GPI ethanolamine phosphate transferase 1 (InterPro:IPR007070), Alkaline-phosphatase-like, core domain (InterPro:IPR017850), Sulfatase (InterPro:IPR000917); Has 1139 Blast hits to 1068 proteins in 222 species: Archae - 0; Bacteria - 85; Metazoa - 475; Fungi - 399; Plants - 79; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      143880..149880 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337332.1 → NP_001326691.1  sulfatase and phosphatidylinositolglycan class N domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VMK0, A0A1I9LQ21, A0A654F349
      Conserved Domains (2) summary
      cd16020
      Location:83 → 397
      GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
      pfam04987
      Location:479 → 952
      PigN; Phosphatidylinositolglycan class N (PIG-N)

    2. NM_001337331.1 → NP_001319441.1  sulfatase and phosphatidylinositolglycan class N domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VMK0, F4JD48
    Nucleotide Protein
    Heading Accession and Version

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