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    CPK9 calmodulin-domain protein kinase 9 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821586, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CPK9
    Official Full Name
    calmodulin-domain protein kinase 9
    Primary source
    TAIR:AT3G20410
    Locus tag
    AT3G20410
    See related
    Araport:AT3G20410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    calmodulin-domain protein kinase 9
    Summary
    calmodulin-domain protein kinase CDPK isoform 9 (CPK9)
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    Genomic context

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    See CPK9 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Sequence:
    Chromosome: 3; NC_003074.8 (7115819..7119144)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene F-box associated ubiquitination effector family protein Neighboring gene RNAse THREE-like protein 2 Neighboring gene phosphorylated adapter RNA export-like protein Neighboring gene Alpha amylase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Calcium-dependent protein kinase CPK9 negatively functions in stomatal abscisic acid signaling by regulating ion channel activity in Arabidopsis. Chen DH, et al. Plant Mol Biol, 2019 Jan. PMID 30536042
    2. Calcium signaling through protein kinases. The Arabidopsis calcium-dependent protein kinase gene family. Cheng SH, et al. Plant Physiol, 2002 Jun. PMID 12068094, Free PMC Article
    3. Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Nühse TS, et al. Mol Cell Proteomics, 2003 Nov. PMID 14506206
    4. Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics. Bellati J, et al. Mol Cell Proteomics, 2016 Nov. PMID 27609422, Free PMC Article
    5. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. These results revealed the role of CPK9 in guard cells, and the need of both CPK9 and CPK33 for accurate guard cell function.
      Title: Calcium-dependent protein kinase CPK9 negatively functions in stomatal abscisic acid signaling by regulating ion channel activity in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001338479.1
    NM_112932.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables calcium/calmodulin-dependent protein kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within signal transduction TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in plasma membrane HDA PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    calmodulin-domain protein kinase 9
    NP_188676.1
    • calmodulin-domain protein kinase 9 (CPK9); FUNCTIONS IN: calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 33 (TAIR:AT1G50700.1); Has 135370 Blast hits to 127423 proteins in 3989 species: Archae - 163; Bacteria - 13987; Metazoa - 51029; Fungi - 18072; Plants - 28065; Viruses - 501; Other Eukaryotes - 23553 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7115819..7119144
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112932.3 → NP_188676.1  calmodulin-domain protein kinase 9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188676.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q38868
      UniProtKB/TrEMBL
      A0A178V5W2, A0A5S9XDY3, A0A7G2EQM0
      Conserved Domains (2) summary
      COG5126
      Location:388 → 528
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      cd05117
      Location:90 → 348
      STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases

    2. NM_001338479.1 → NP_001327803.1  calmodulin-domain protein kinase 9 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q38868
      UniProtKB/TrEMBL
      A0A178V5W2, A0A5S9XDY3, A0A7G2EQM0
      Conserved Domains (2) summary
      COG5126
      Location:388 → 528
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      cd05117
      Location:90 → 348
      STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q38868.1

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