U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    HAK5 high affinity K+ transporter 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826973, updated on 10-Oct-2024

    Summary

    Official Symbol
    HAK5
    Official Full Name
    high affinity K+ transporter 5
    Primary source
    TAIR:AT4G13420
    Locus tag
    AT4G13420
    See related
    Araport:AT4G13420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5; ATHAK5; high affinity K+ transporter 5; T9E8.160; T9E8_160
    Summary
    Encodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See HAK5 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (7796782..7802251, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene Nucleotide-diphospho-sugar transferases superfamily protein Neighboring gene isopropyl malate isomerase large subunit 1 Neighboring gene ncRNA

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    NM_117416.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables potassium ion transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables potassium ion transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables potassium:sodium symporter activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    high affinity K+ transporter 5
    NP_567404.1
    • high affinity K+ transporter 5 (HAK5); FUNCTIONS IN: potassium ion transmembrane transporter activity, potassium:sodium symporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT1G60160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      7796782..7802251 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117416.3NP_567404.1  high affinity K+ transporter 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567404.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M7K4, Q9T0L3
      UniProtKB/TrEMBL
      A0A5S9XRW8, Q53XI1
      Conserved Domains (1) summary
      cl15781
      Location:2783
      K_trans; K+ potassium transporter