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    ML3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827537, updated on 11-Sep-2024

    Summary

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    Official Symbol
    ML3
    Primary source
    TAIR:AT4G18120
    Locus tag
    AT4G18120
    See related
    Araport:AT4G18120
    Gene type
    miscRNA
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AML3; F15J5.90; F15J5_90; MEI2-like 3
    Summary
    A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML3 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML3 is the transcript with highest frequency of alternative splicing. Expression was detected during early embryo development (heart and torpedo stage); no accumulation was detected in vegetative and floral apices, as revealed by in situ hybridization.
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    Genomic context

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    See ML3 in Genome Data Viewer
    Location:
    chromosome: 4
    Sequence:
    Chromosome: 4; NC_003075.7 (10038131..10041950)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L32e Neighboring gene RING/U-box superfamily protein Neighboring gene phytochrome E Neighboring gene SCP1-like small phosphatase 4b Neighboring gene Serine/Threonine-kinase, putative (DUF1296)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ML3: a novel regulator of herbivory-induced responses in Arabidopsis thaliana. Fridborg I, et al. J Exp Bot, 2013 Feb. PMID 23314818, Free PMC Article
    2. ML3 is a NEDD8- and ubiquitin-modified protein. Hakenjos JP, et al. Plant Physiol, 2013 Sep. PMID 23903439, Free PMC Article
    3. Diversification of genes encoding mei2 -like RNA binding proteins in plants. Anderson GH, et al. Plant Mol Biol, 2004 Mar. PMID 15356386

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. ML3 has a role in pathogen response.
      Title: ML3 is a NEDD8- and ubiquitin-modified protein.
    2. ML3 plays a role in plant defence against the generalist herbivore Spodoptera.
      Title: ML3: a novel regulator of herbivory-induced responses in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    • AT4G18120.1
    • AT4G18120.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    Gene LinkOut

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