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    calmodulin-binding protein (DUF1645) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816070, updated on 18-Sep-2024

    Summary

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    Official Full Name
    calmodulin-binding protein (DUF1645)
    Primary source
    TAIR:AT2G15760
    Locus tag
    AT2G15760
    See related
    Araport:AT2G15760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F9O13.1
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (6865610..6867004, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene C2H2-like zinc finger protein Neighboring gene pseudo Neighboring gene miscRNA Neighboring gene Cupredoxin superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genes encoding calmodulin-binding proteins in the Arabidopsis genome. Reddy VS, et al. J Biol Chem, 2002 Mar 22. PMID 11782485
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_127138.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calmodulin binding TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    calmodulin-binding protein (DUF1645)
    NP_565379.1
    • Protein of unknown function (DUF1645); FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT2G26530.2); Has 171 Blast hits to 167 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      6865610..6867004 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127138.2 → NP_565379.1  calmodulin-binding protein (DUF1645) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565379.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VWW5, A0A654ET63, Q9ZQD8
      Conserved Domains (1) summary
      pfam07816
      Location:91 → 286
      DUF1645; Protein of unknown function (DUF1645)
    Nucleotide Protein
    Heading Accession and Version

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