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    ABCE3 non-intrinsic ABC protein 15 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829153, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ABCE3
    Official Full Name
    non-intrinsic ABC protein 15
    Primary source
    TAIR:AT4G30300
    Locus tag
    AT4G30300
    See related
    Araport:AT4G30300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 15; ATNAP15; ATP-binding cassette E3; F17I23.360; F17I23_360; NAP15; non-intrinsic ABC protein 15
    Summary
    member of NAP subfamily
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    Genomic context

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    See ABCE3 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (14831005..14831550, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene xyloglucan endotransglucosylase/hydrolase 18 Neighboring gene xyloglucan endotransglucosylase/hydrolase 19 Neighboring gene FGGY family of carbohydrate kinase Neighboring gene CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Arabidopsis thaliana ABC protein superfamily, a complete inventory. Sánchez-Fernández R, et al. J Biol Chem, 2001 Aug 10. PMID 11346655
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_119176.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    non-intrinsic ABC protein 15
    NP_194759.1
    • non-intrinsic ABC protein 15 (NAP15); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: RNAse l inhibitor protein 2 (TAIR:AT4G19210.1); Has 178874 Blast hits to 170972 proteins in 3466 species: Archae - 4111; Bacteria - 144876; Metazoa - 3882; Fungi - 1523; Plants - 1775; Viruses - 14; Other Eukaryotes - 22693 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14831005..14831550 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119176.1 → NP_194759.1  non-intrinsic ABC protein 15 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194759.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M0D0
      UniProtKB/TrEMBL
      A0A178V187, A0A5S9XX85, A0A654FU99
      Conserved Domains (1) summary
      cl38936
      Location:1 → 177
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M0D0.1

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