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    CAD6 cinnamyl alcohol dehydrogenase 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829953, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CAD6
    Official Full Name
    cinnamyl alcohol dehydrogenase 6
    Primary source
    TAIR:AT4G37970
    Locus tag
    AT4G37970
    See related
    Araport:AT4G37970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCAD6; cinnamyl alcohol dehydrogenase 6; F20D10.90; F20D10_90
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    Genomic context

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    See CAD6 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (17849538..17852279)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene AGAMOUS-like 21 Neighboring gene Rhamnogalacturonate lyase family protein Neighboring gene cinnamyl alcohol dehydrogenase 7 Neighboring gene cinnamyl alcohol dehydrogenase 8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression of cinnamyl alcohol dehydrogenases and their putative homologues during Arabidopsis thaliana growth and development: lessons for database annotations? Kim SJ, et al. Phytochemistry, 2007 Jul. PMID 17467016
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_001342468.1
    NM_119958.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cinnamyl-alcohol dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in lignin biosynthetic process IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cinnamyl alcohol dehydrogenase 6
    NP_195510.1
    • cinnamyl alcohol dehydrogenase 6 (CAD6); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase 9 (TAIR:AT4G39330.1); Has 35385 Blast hits to 35371 proteins in 2946 species: Archae - 789; Bacteria - 23408; Metazoa - 1218; Fungi - 2700; Plants - 2633; Viruses - 3; Other Eukaryotes - 4634 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17849538..17852279
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342466.1 → NP_001327960.1  cinnamyl alcohol dehydrogenase 6 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B366

    2. NM_001342467.1 → NP_001327959.1  cinnamyl alcohol dehydrogenase 6 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B363

    3. NM_119958.4 → NP_195510.1  cinnamyl alcohol dehydrogenase 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195510.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65621
      UniProtKB/TrEMBL
      A0A178UZ27, A0A5S9XZK8, A0A654FWK1
      Conserved Domains (1) summary
      cd05283
      Location:15 → 353
      CAD1; Cinnamyl alcohol dehydrogenases (CAD)

    4. NM_001342468.1 → NP_001327958.1  cinnamyl alcohol dehydrogenase 6 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZ27, A0A1P8B369, A0A5S9XZK8
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O65621.1

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