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    CYP94D2 cytochrome P450, family 94, subfamily D, polypeptide 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824830, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYP94D2
    Official Full Name
    cytochrome P450, family 94, subfamily D, polypeptide 2
    Primary source
    TAIR:AT3G56630
    Locus tag
    AT3G56630
    See related
    Araport:AT3G56630
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''cytochrome P450; cytochrome P450; family 94; polypeptide 2; polypeptide 2''; subfamily D
    Summary
    member of CYP94D
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    Genomic context

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    See CYP94D2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (20978901..20980772)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene prolamin-like protein Neighboring gene nodulin MtN21 /EamA-like transporter family protein Neighboring gene exocyst complex component sec15A Neighboring gene thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) Neighboring gene basic region/leucine zipper motif protein 49

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_115522.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    cytochrome P450, family 94, subfamily D, polypeptide 2
    NP_191222.1
    • ''cytochrome P450, family 94, subfamily D, polypeptide 2'' (CYP94D2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily D, polypeptide 1 (TAIR:AT1G34540.1); Has 28588 Blast hits to 28499 proteins in 1478 species: Archae - 44; Bacteria - 2617; Metazoa - 10641; Fungi - 6172; Plants - 8084; Viruses - 3; Other Eukaryotes - 1027 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      20978901..20980772
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115522.4 → NP_191222.1  cytochrome P450, family 94, subfamily D, polypeptide 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191222.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V9L2, A0A384LI94, A0A5S9XLF0, A0A654FHB0, Q9LXX7
      Conserved Domains (1) summary
      cd11064
      Location:64 → 491
      CYP86A; cytochrome P450 family 86, subfamily A
    Nucleotide Protein
    Heading Accession and Version

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