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    PRA1.G2 prenylated RAB acceptor 1.G2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835722, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PRA1.G2
    Official Full Name
    prenylated RAB acceptor 1.G2
    Primary source
    TAIR:AT5G56230
    Locus tag
    AT5G56230
    See related
    Araport:AT5G56230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K24C1.4; K24C1_4; prenylated RAB acceptor 1.G2
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    Genomic context

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    See PRA1.G2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (22758544..22759556, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene ncRNA Neighboring gene hapless protein Neighboring gene hapless 8 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The PRA1 gene family in Arabidopsis. Alvim Kamei CL, et al. Plant Physiol, 2008 Aug. PMID 18583532, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_125006.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within vesicle-mediated transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    prenylated RAB acceptor 1.G2
    NP_200434.1
    • prenylated RAB acceptor 1.G2 (PRA1.G2); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: prenylated RAB acceptor 1.G1 (TAIR:AT1G55640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22758544..22759556 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125006.3 → NP_200434.1  prenylated RAB acceptor 1.G2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200434.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FH16
      UniProtKB/TrEMBL
      A0A178UHN0, A0A5S9YGU4, A0A654GBQ0
      Conserved Domains (1) summary
      pfam03208
      Location:30 → 170
      PRA1; PRA1 family protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FH16.1

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