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    Proteinase inhibitor I25, cystatin, conserved region [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835793, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Proteinase inhibitor I25, cystatin, conserved region
    Primary source
    TAIR:AT5G56910
    Locus tag
    AT5G56910
    See related
    Araport:AT5G56910
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MHM17.2; MHM17_2
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (23022862..23024257)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene CwfJ-like family protein / zinc finger (CCCH-type) family protein Neighboring gene Cystatin/monellin superfamily protein Neighboring gene CCCH-type zinc finger family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_125073.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Proteinase inhibitor I25, cystatin, conserved region
    NP_200501.1
    • Proteinase inhibitor I25, cystatin, conserved region; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381), Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT5G56920.1); Has 58 Blast hits to 58 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      23022862..23024257
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125073.4 → NP_200501.1  Proteinase inhibitor I25, cystatin, conserved region [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200501.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UKJ4, A0A654GCQ5, Q9LTS9
    Nucleotide Protein
    Heading Accession and Version

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