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    transcription repressor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816504, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transcription repressor
    Primary source
    TAIR:AT2G19850
    Locus tag
    AT2G19850
    See related
    Araport:AT2G19850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6F22.12; F6F22_12
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (8568569..8569890)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene SNF7 family protein Neighboring gene pseudo Neighboring gene hexokinase 2 Neighboring gene tRNA/rRNA methyltransferase (SpoU) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NM_001161052.2
    NM_127543.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    transcription repressor
    NP_001154524.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54730.4); Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
    NP_179575.4
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54730.1); Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      8568569..8569890
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127543.4 → NP_179575.4  transcription repressor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179575.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XQC4, F4ITH5

    2. NM_001161052.2 → NP_001154524.1  transcription repressor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154524.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4ITH6
    Nucleotide Protein
    Heading Accession and Version

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