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    B3 domain protein (DUF313) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817003, updated on 18-Sep-2024

    Summary

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    Official Full Name
    B3 domain protein (DUF313)
    Primary source
    TAIR:AT2G24670
    Locus tag
    AT2G24670
    See related
    Araport:AT2G24670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F25P17.3; F25P17_3
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (10492669..10493567)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene B3 domain-containing protein REM13 Neighboring gene pseudo Neighboring gene transcriptional factor B3 family protein Neighboring gene AP2/B3-like transcriptional factor family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_128028.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    B3 domain protein (DUF313)
    NP_180043.1
    • Domain of unknown function (DUF313); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF313 (InterPro:IPR005508); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF313) (TAIR:AT3G24850.1); Has 144 Blast hits to 144 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10492669..10493567
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128028.2 → NP_180043.1  B3 domain protein (DUF313) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180043.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SJ98
      UniProtKB/TrEMBL
      A0A5S9X123, A0A654F0U2, A0A7G2ECX9
      Conserved Domains (1) summary
      pfam03754
      Location:107 → 221
      DUF313; Domain of unknown function (DUF313)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SJ98.1

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