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    Peptidase M20/M25/M40 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841021, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Peptidase M20/M25/M40 family protein
    Primary source
    TAIR:AT1G44180
    Locus tag
    AT1G44180
    See related
    Araport:AT1G44180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T7O23.14; T7O23_14
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (16807828..16810565, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene HSP40/DnaJ peptide-binding protein Neighboring gene aldehyde dehydrogenase 3H1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables aminoacylase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in amino acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in endoplasmic reticulum HDA PubMed 
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    Peptidase M20/M25/M40 family protein
    NP_175082.1
    • Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, aminoacylase activity; INVOLVED IN: metabolic process, cellular amino acid metabolic process; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44820.1); Has 4667 Blast hits to 4663 proteins in 1414 species: Archae - 143; Bacteria - 3143; Metazoa - 394; Fungi - 232; Plants - 81; Viruses - 2; Other Eukaryotes - 672 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      16807828..16810565 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333229.1 → NP_001321916.1  Peptidase M20/M25/M40 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WGG4, A0A7G2DVU6, Q9C6Y8

    2. NM_001333228.1 → NP_001321917.1  Peptidase M20/M25/M40 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WGG4, A0A7G2DVU6, Q9C6Y8

    3. NM_103542.2 → NP_175082.1  Peptidase M20/M25/M40 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175082.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WGG4, A0A7G2DVU6, Q9C6Y8
      Conserved Domains (2) summary
      cd05646
      Location:28 → 430
      M20_AcylaseI_like; M20 Aminoacylase-I like subfamily
      TIGR01880
      Location:23 → 432
      Ac-peptdase-euk; N-acyl-L-amino-acid amidohydrolase
    Nucleotide Protein
    Heading Accession and Version

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