U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    FMN-linked oxidoreductases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838382, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    FMN-linked oxidoreductases superfamily protein
    Primary source
    TAIR:AT1G18020
    Locus tag
    AT1G18020
    See related
    Araport:AT1G18020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (6202235..6204234)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Major facilitator superfamily protein Neighboring gene Major facilitator superfamily protein Neighboring gene Protein phosphatase 2C family protein Neighboring gene ncRNA Neighboring gene cyclin-dependent kinase D1;3 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Intronic T-DNA insertion renders Arabidopsis opr3 a conditional jasmonic acid-producing mutant. Chehab EW, et al. Plant Physiol, 2011 Jun. PMID 21487047, Free PMC Article
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    NM_179352.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables FMN binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    FMN-linked oxidoreductases superfamily protein
    NP_849683.1
    • FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155), Aldolase-type TIM barrel (InterPro:IPR013785); BEST Arabidopsis thaliana protein match is: FMN-linked oxidoreductases superfamily protein (TAIR:AT1G17990.1); Has 13076 Blast hits to 13058 proteins in 2049 species: Archae - 127; Bacteria - 9786; Metazoa - 29; Fungi - 859; Plants - 433; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6202235..6204234
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179352.5 → NP_849683.1  FMN-linked oxidoreductases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849683.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P0DI08, P0DI09, Q9C5W1, Q9LDU9
      UniProtKB/TrEMBL
      A0A5S9UX72, A0A654EBL8
      Conserved Domains (1) summary
      cd02933
      Location:8 → 257
      OYE_like_FMN; Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0DI08.1
    P0DI09.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials