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    Got1/Sft2-like vescicle transport protein family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837087, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Got1/Sft2-like vescicle transport protein family
    Primary source
    TAIR:AT1G05785
    Locus tag
    AT1G05785
    See related
    Araport:AT1G05785
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (1730242..1732657)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Vacuolar ATPase assembly integral membrane protein VMA21-like domain-containing protein Neighboring gene microRNA ath-MIR5656 precursor Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene lipase class 3 family protein Neighboring gene alpha/beta-Hydrolases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001331577.1
    NM_001331578.1
    NM_001331579.1
    NM_001331580.1
    NM_001331581.1
    NM_148438.4
    NM_180604.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in retrograde transport, endosome to Golgi IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Got1/Sft2-like vescicle transport protein family
    NP_683279.1
    • Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT5G01430.2); Has 450 Blast hits to 450 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 165; Fungi - 111; Plants - 97; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).
    NP_850935.1
    • Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT5G01430.2); Has 450 Blast hits to 450 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 165; Fungi - 111; Plants - 97; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1730242..1732657
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180604.3 → NP_850935.1  Got1/Sft2-like vescicle transport protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850935.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHN4, A0A384KWJ8, Q8GWH4
      Conserved Domains (1) summary
      cl02130
      Location:5 → 127
      Got1; Got1/Sft2-like family

    2. NM_001331578.1 → NP_001320875.1  Got1/Sft2-like vescicle transport protein family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AP49

    3. NM_001331577.1 → NP_001320873.1  Got1/Sft2-like vescicle transport protein family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AP61

    4. NM_001331579.1 → NP_001320874.1  Got1/Sft2-like vescicle transport protein family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHN4, A0A384KWJ8, Q8GWH4
      Conserved Domains (1) summary
      cl02130
      Location:5 → 127
      Got1; Got1/Sft2-like family

    5. NM_148438.4 → NP_683279.1  Got1/Sft2-like vescicle transport protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_683279.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHN4, A0A384KWJ8, Q8GWH4
      Conserved Domains (1) summary
      cl02130
      Location:5 → 127
      Got1; Got1/Sft2-like family

    6. NM_001331580.1 → NP_001320876.1  Got1/Sft2-like vescicle transport protein family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHM5, A0A1P8AP81
      Conserved Domains (1) summary
      cl02130
      Location:5 → 120
      Got1; Got1/Sft2-like family

    7. NM_001331581.1 → NP_001320877.1  Got1/Sft2-like vescicle transport protein family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHM5, A0A1P8AP81
      Conserved Domains (1) summary
      cl02130
      Location:5 → 120
      Got1; Got1/Sft2-like family
    Nucleotide Protein
    Heading Accession and Version

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