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    Calcium-dependent protein kinase (CDPK) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841382, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Calcium-dependent protein kinase (CDPK) family protein
    Primary source
    TAIR:AT1G49580
    Locus tag
    AT1G49580
    See related
    Araport:AT1G49580
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14J22.18; F14J22_18
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    11
    Sequence:
    Chromosome: 1; NC_003070.9 (18351324..18354634)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Homeodomain-like superfamily protein Neighboring gene Peroxidase superfamily protein Neighboring gene C2H2 and C2HC zinc fingers superfamily protein Neighboring gene RNA-binding protein 47A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Members of the Plant CRK Superfamily Are Capable of Trans- and Autophosphorylation of Tyrosine Residues. Nemoto K, et al. J Biol Chem, 2015 Jul 3. PMID 25969537, Free PMC Article
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_103846.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Calcium-dependent protein kinase (CDPK) family protein
    NP_175381.1
    • Calcium-dependent protein kinase (CDPK) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G19100.1); Has 118201 Blast hits to 116445 proteins in 3162 species: Archae - 162; Bacteria - 14319; Metazoa - 43815; Fungi - 12645; Plants - 25821; Viruses - 463; Other Eukaryotes - 20976 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      18351324..18354634
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103846.4 → NP_175381.1  Calcium-dependent protein kinase (CDPK) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175381.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FX86
      UniProtKB/TrEMBL
      A0A178W6T2
      Conserved Domains (3) summary
      smart00220
      Location:151 → 412
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      COG5126
      Location:452 → 592
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      cd05117
      Location:151 → 411
      STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FX86.1

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