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    Telomerase activating protein Est1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839720, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Telomerase activating protein Est1
    Primary source
    TAIR:AT1G28260
    Locus tag
    AT1G28260
    See related
    Araport:AT1G28260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3H9.9; F3H9_9
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (9875527..9879433, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene purine permease 1 Neighboring gene strawberry notch protein (DUF616) Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ralf-like 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_102591.5
    NM_202198.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Telomerase activating protein Est1
    NP_174147.1
    • Telomerase activating protein Est1; CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 (InterPro:IPR019458); BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT5G19400.2); Has 490 Blast hits to 489 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 280; Fungi - 120; Plants - 68; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
    NP_973927.1
    • Telomerase activating protein Est1; CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 (InterPro:IPR019458); BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT5G19400.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      9875527..9879433 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_202198.2 → NP_973927.1  Telomerase activating protein Est1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973927.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84WB4, Q9FZ99
      UniProtKB/TrEMBL
      A0A178WAP1
      Conserved Domains (2) summary
      pfam10373
      Location:164 → 471
      EST1_DNA_bind; Est1 DNA/RNA binding domain
      pfam10374
      Location:70 → 151
      EST1; Telomerase activating protein Est1

    2. NM_102591.5 → NP_174147.1  Telomerase activating protein Est1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174147.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84WB4, Q9FZ99
      UniProtKB/TrEMBL
      A0A178WAP1
      Conserved Domains (2) summary
      pfam10373
      Location:164 → 471
      EST1_DNA_bind; Est1 DNA/RNA binding domain
      pfam10374
      Location:70 → 151
      EST1; Telomerase activating protein Est1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FZ99.1

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