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    Endosomal targeting BRO1-like domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843674, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Endosomal targeting BRO1-like domain-containing protein
    Primary source
    TAIR:AT1G73390
    Locus tag
    AT1G73390
    See related
    Araport:AT1G73390
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9L24.40; T9L24_40
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    14
    Sequence:
    Chromosome: 1; NC_003070.9 (27590810..27595752, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene homeodomain GLABROUS 11 Neighboring gene sucrose synthase 6 Neighboring gene uncharacterized protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene myb domain protein 54

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An abscisic acid-responsive protein interaction network for sucrose non-fermenting related kinase1 in abiotic stress response. Carianopol CS, et al. Commun Biol, 2020 Mar 26. PMID 32218501, Free PMC Article
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001124122.1
    NM_001334592.1
    NM_001334594.1
    NM_105999.5
    NM_202408.3
    NM_202409.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Endosomal targeting BRO1-like domain-containing protein
    NP_001117594.1
    • Endosomal targeting BRO1-like domain-containing protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: Endosomal targeting BRO1-like domain-containing protein (TAIR:AT1G17940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_177482.1
    • Endosomal targeting BRO1-like domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: Endosomal targeting BRO1-like domain-containing protein (TAIR:AT1G17940.1); Has 147 Blast hits to 147 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 24; Plants - 97; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    NP_974137.1
    • Endosomal targeting BRO1-like domain-containing protein; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: Endosomal targeting BRO1-like domain-containing protein (TAIR:AT1G17940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_974138.1
    • Endosomal targeting BRO1-like domain-containing protein; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: Endosomal targeting BRO1-like domain-containing protein (TAIR:AT1G17940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27590810..27595752 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334593.1 → NP_001321809.1  Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WBP9, A0A5S9WU10, Q9FX34

    2. NM_202408.3 → NP_974137.1  Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974137.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WBP9, A0A5S9WU10, Q9FX34
      Conserved Domains (1) summary
      cd09034
      Location:17 → 398
      BRO1_Alix_like; Protein-interacting Bro1-like domain of mammalian Alix and related domains

    3. NM_001334592.1 → NP_001321810.1  Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WBP9, A0A5S9WU10, Q9FX34

    4. NM_202409.2 → NP_974138.1  Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974138.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WBP9, A0A5S9WU10, Q9FX34
      Conserved Domains (1) summary
      cd09034
      Location:17 → 398
      BRO1_Alix_like; Protein-interacting Bro1-like domain of mammalian Alix and related domains

    5. NM_001124122.1 → NP_001117594.1  Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001117594.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WBP9, A0A5S9WU10, B3H6Z1
      Conserved Domains (1) summary
      cd09034
      Location:17 → 337
      BRO1_Alix_like; Protein-interacting Bro1-like domain of mammalian Alix and related domains

    6. NM_001334594.1 → NP_001321811.1  Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WBP9, A0A5S9WU10, Q9FX34

    7. NM_105999.5 → NP_177482.1  Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177482.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WBP9, A0A5S9WU10, Q9FX34
      Conserved Domains (1) summary
      cd09034
      Location:17 → 398
      BRO1_Alix_like; Protein-interacting Bro1-like domain of mammalian Alix and related domains
    Nucleotide Protein
    Heading Accession and Version

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