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    reverse transcriptase-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842918, updated on 18-Sep-2024

    Summary

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    Official Full Name
    reverse transcriptase-like protein
    Primary source
    TAIR:AT1G66045
    Locus tag
    AT1G66045
    See related
    Araport:AT1G66045
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (24588269..24588794)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 96, subfamily A, polypeptide 14 pseudogene Neighboring gene Zinc finger (C3HC4-type RING finger) family protein Neighboring gene Zinc finger (C3HC4-type RING finger) family protein Neighboring gene hypothetical protein (DUF577)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables RNA-DNA hybrid ribonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    reverse transcriptase-like protein
    NP_683471.1
    • unknown protein; Has 22 Blast hits to 22 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24588269..24588794
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_148630.1 → NP_683471.1  reverse transcriptase-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_683471.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WIB8, A0A7G2E3K6, F4ID71
      Conserved Domains (1) summary
      cl14782
      Location:39 → 134
      RNase_H_like; Ribonuclease H-like superfamily, including RNase H, HI, HII, HIII, and RNase-like domain IV of spliceosomal protein Prp8
    Nucleotide Protein
    Heading Accession and Version

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