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    LGT8 glucosyl transferase family 8 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843345, updated on 18-Sep-2024

    Summary

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    Official Symbol
    LGT8
    Official Full Name
    glucosyl transferase family 8
    Primary source
    TAIR:AT1G70090
    Locus tag
    AT1G70090
    See related
    Araport:AT1G70090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F20P5.18; F20P5_18; GALACTURONOSYLTRANSFERASE-LIKE 9; GATL9; glucosyl transferase family 8
    Summary
    Encodes a protein with putative galacturonosyltransferase activity.
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    Genomic context

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    See LGT8 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (26400694..26402815)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DEAD/DEAH box helicase Neighboring gene Terpenoid cyclases/Protein prenyltransferases superfamily protein Neighboring gene neurofilament heavy protein Neighboring gene Concanavalin A-like lectin protein kinase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular analysis of a family of Arabidopsis genes related to galacturonosyltransferases. Kong Y, et al. Plant Physiol, 2011 Apr. PMID 21300919, Free PMC Article
    2. Functional identification of an Arabidopsis pectin biosynthetic homogalacturonan galacturonosyltransferase. Sterling JD, et al. Proc Natl Acad Sci U S A, 2006 Mar 28. PMID 16540543, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001124104.1
    NM_105677.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables polygalacturonate 4-alpha-galacturonosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in pectin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glucosyl transferase family 8
    NP_001117576.1
    • glucosyl transferase family 8 (LGT8); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G24170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_564983.1
    • glucosyl transferase family 8 (LGT8); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G24170.1); Has 2070 Blast hits to 2058 proteins in 476 species: Archae - 0; Bacteria - 1035; Metazoa - 229; Fungi - 4; Plants - 727; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26400694..26402815
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105677.3 → NP_564983.1  glucosyl transferase family 8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564983.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O04536
      UniProtKB/TrEMBL
      A0A178WIQ1, A0A5S9WTF3, W8Q3M8
      Conserved Domains (1) summary
      pfam01501
      Location:83 → 341
      Glyco_transf_8; Glycosyl transferase family 8

    2. NM_001124104.1 → NP_001117576.1  glucosyl transferase family 8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001117576.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O04536
      UniProtKB/TrEMBL
      A0A178WIQ1, A0A5S9WTF3, W8Q3M8
      Conserved Domains (1) summary
      pfam01501
      Location:83 → 341
      Glyco_transf_8; Glycosyl transferase family 8
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O04536.1

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