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    DUF3754 family protein, putative (DUF3754) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819305, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DUF3754 family protein, putative (DUF3754)
    Primary source
    TAIR:AT2G46915
    Locus tag
    AT2G46915
    See related
    Araport:AT2G46915
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    15
    Sequence:
    Chromosome: 2; NC_003071.7 (19273899..19277773, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene 3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295) Neighboring gene transcription factor-like protein Neighboring gene Plastid-lipid associated protein PAP / fibrillin family protein Neighboring gene Protein phosphatase 2C family protein Neighboring gene Pectinacetylesterase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001337222.1
    NM_180131.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DUF3754 family protein, putative (DUF3754)
    NP_850462.2
    • Protein of unknown function (DUF3754); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3754 (InterPro:IPR022227); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3754) (TAIR:AT3G19340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19273899..19277773 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180131.2 → NP_850462.2  DUF3754 family protein, putative (DUF3754) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850462.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F2L1, F4IK40
      Conserved Domains (1) summary
      pfam12576
      Location:475 → 605
      DUF3754; Protein of unknown function (DUF3754)

    2. NM_001337222.1 → NP_001323684.1  DUF3754 family protein, putative (DUF3754) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AXY3, A0A654F2L1
    Nucleotide Protein
    Heading Accession and Version

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