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    ribosomal protein L6 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816355, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ribosomal protein L6 family protein
    Primary source
    TAIR:AT2G18400
    Locus tag
    AT2G18400
    See related
    Araport:AT2G18400
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T30D6.9; T30D6_9
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (7989476..7990586, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene GATA transcription factor 20 Neighboring gene ADP-ribosylation factor family protein Neighboring gene elongator complex protein Neighboring gene Gibberellin-regulated family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_127397.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ribosomal protein L6 family protein
    NP_565438.1
    • ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, bacterial-type (InterPro:IPR019906), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site (InterPro:IPR002358); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G05190.1); Has 7681 Blast hits to 7681 proteins in 2698 species: Archae - 1; Bacteria - 5446; Metazoa - 4; Fungi - 120; Plants - 122; Viruses - 0; Other Eukaryotes - 1988 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7989476..7990586 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127397.3 → NP_565438.1  ribosomal protein L6 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565438.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VTV9, Q94B04, Q9ZPX2
      Conserved Domains (1) summary
      TIGR03654
      Location:5 → 93
      L6_bact; ribosomal protein L6, bacterial type
    Nucleotide Protein
    Heading Accession and Version

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