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    TTN5 ADP-ribosylation factor family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816354, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TTN5
    Official Full Name
    ADP-ribosylation factor family protein
    Primary source
    TAIR:AT2G18390
    Locus tag
    AT2G18390
    See related
    Araport:AT2G18390
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARF-LIKE 2; ARL2; ATARLC1; HAL; HALLIMASCH; T30D6.10; T30D6_10; TITAN 5
    Summary
    Encodes a member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. Mutant has abnormal mitosis and cell cycle control during seed development.
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    Genomic context

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    See TTN5 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (7988165..7989525)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene GATA transcription factor 20 Neighboring gene ribosomal protein L6 family protein Neighboring gene elongator complex protein Neighboring gene Gibberellin-regulated family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The TITAN5 gene of Arabidopsis encodes a protein related to the ADP ribosylation factor family of GTP binding proteins. McElver J, et al. Plant Cell, 2000 Aug. PMID 10948257, Free PMC Article
    2. ARL2, ARG1 and PIN3 define a gravity signal transduction pathway in root statocytes. Harrison BR, et al. Plant J, 2008 Jan. PMID 18047472
    3. The Arabidopsis PILZ group genes encode tubulin-folding cofactor orthologs required for cell division but not cell growth. Steinborn K, et al. Genes Dev, 2002 Apr 15. PMID 11959844, Free PMC Article
    4. Analysis of the small GTPase gene superfamily of Arabidopsis. Vernoud V, et al. Plant Physiol, 2003 Mar. PMID 12644670, Free PMC Article
    5. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_127396.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTP binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within embryo sac cellularization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within endosperm development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within gravitropism NAS
    Non-traceable Author Statement
    more info
    		  
    acts_upstream_of_or_within microtubule cytoskeleton organization TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within tubulin complex assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor family protein
    NP_179430.1
    • TITAN 5 (TTN5); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: in 6 processes; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 10006 Blast hits to 10000 proteins in 420 species: Archae - 13; Bacteria - 39; Metazoa - 4544; Fungi - 1627; Plants - 1505; Viruses - 3; Other Eukaryotes - 2275 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7988165..7989525
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127396.3 → NP_179430.1  ADP-ribosylation factor family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179430.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q547H2, Q9ZPX1
      UniProtKB/TrEMBL
      A0A178VQD7, A0A5S9WZ56
      Conserved Domains (1) summary
      cd04154
      Location:17 → 176
      Arl2; Arf-like 2 (Arl2) GTPase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZPX1.1

    Gene LinkOut

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