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    DENN (AEX-3) domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816551, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DENN (AEX-3) domain-containing protein
    Primary source
    TAIR:AT2G20320
    Locus tag
    AT2G20320
    See related
    Araport:AT2G20320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F11A3.13; F11A3_13
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    19
    Sequence:
    Chromosome: 2; NC_003071.7 (8766486..8772668)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene RPM1 interacting protein 13 Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Neighboring gene Integrase-type DNA-binding superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001335675.1
    NM_127591.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DENN (AEX-3) domain-containing protein
    NP_179622.5
    • DENN (AEX-3) domain-containing protein; CONTAINS InterPro DOMAIN/s: uDENN (InterPro:IPR005113), dDENN (InterPro:IPR005112), DENN (InterPro:IPR001194); BEST Arabidopsis thaliana protein match is: DENN (AEX-3) domain-containing protein (TAIR:AT5G35560.1); Has 1567 Blast hits to 1546 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 1072; Fungi - 78; Plants - 117; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      8766486..8772668
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127591.6 → NP_179622.5  DENN (AEX-3) domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179622.5

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WZH8, A0A7G2E9T0, F4IUH2
      Conserved Domains (3) summary
      smart00801
      Location:974 → 1020
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:730 → 901
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      pfam03456
      Location:399 → 475
      uDENN; uDENN domain

    2. NM_001335675.1 → NP_001324599.1  DENN (AEX-3) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WZH8, A0A7G2E9T0, F4IUH2
      Conserved Domains (3) summary
      smart00801
      Location:974 → 1020
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:730 → 901
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      pfam03456
      Location:399 → 475
      uDENN; uDENN domain
    Nucleotide Protein
    Heading Accession and Version

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