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    GPAT1 glycerol-3-phosphate acyltransferase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837163, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GPAT1
    Official Full Name
    glycerol-3-phosphate acyltransferase 1
    Primary source
    TAIR:AT1G06520
    Locus tag
    AT1G06520
    See related
    Araport:AT1G06520
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATGPAT1; F12K11.15; F12K11_15; glycerol-3-phosphate acyltransferase 1; GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1; sn-2-GPAT1
    Summary
    sn-glycerol-3-phosphate 2-O-acyltransferase. Expressed in flower buds and siliques. Homozygous mutant plants are male sterile.
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    Genomic context

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    See GPAT1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (1993903..1996355, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene transmembrane protein, putative (DUF3317) Neighboring gene ncRNA Neighboring gene forkhead-associated domain protein Neighboring gene uncharacterized protein Neighboring gene Tropomyosin-like protein Neighboring gene ATP-dependent caseinolytic (Clp) protease/crotonase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A GPAT1 Mutation in Arabidopsis Enhances Plant Height but Impairs Seed Oil Biosynthesis. Bai Y, et al. Int J Mol Sci, 2021 Jan 14. PMID 33466786, Free PMC Article
    2. Arabidopsis AtGPAT1, a member of the membrane-bound glycerol-3-phosphate acyltransferase gene family, is essential for tapetum differentiation and male fertility. Zheng Z, et al. Plant Cell, 2003 Aug. PMID 12897259, Free PMC Article
    3. A land-plant-specific glycerol-3-phosphate acyltransferase family in Arabidopsis: substrate specificity, sn-2 preference, and evolution. Yang W, et al. Plant Physiol, 2012 Oct. PMID 22864585, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. A GPAT1 Mutation in Arabidopsis Enhances Plant Height but Impairs Seed Oil Biosynthesis.
      Title: A GPAT1 Mutation in Arabidopsis Enhances Plant Height but Impairs Seed Oil Biosynthesis.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Markers

    • At1g06520_Arabidopsis_lyrata_ssp._lyrata_CAN10 (e-PCR)
    • At1g06520_Arabidopsis_lyrata_ssp._petraea_GER11 (e-PCR)
    NM_100531.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycerol-3-phosphate 2-O-acyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables glycerol-3-phosphate O-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in CDP-diacylglycerol biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within pollen sperm cell differentiation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glycerol-3-phosphate acyltransferase 1
    NP_563768.1
    • glycerol-3-phosphate acyltransferase 1 (GPAT1); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 2 (TAIR:AT1G02390.1); Has 381 Blast hits to 368 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1993903..1996355 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100531.3 → NP_563768.1  glycerol-3-phosphate acyltransferase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563768.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L8V5, Q9SHJ5
      UniProtKB/TrEMBL
      A0A178WJK8, Q0WPD4
      Conserved Domains (3) summary
      cd06551
      Location:368 → 558
      LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis
      PLN02177
      Location:95 → 584
      PLN02177; glycerol-3-phosphate acyltransferase
      pfam12710
      Location:106 → 241
      HAD; haloacid dehalogenase-like hydrolase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SHJ5.1

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