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    CHX6B cation/H+ exchanger 6B [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837334, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CHX6B
    Official Full Name
    cation/H+ exchanger 6B
    Primary source
    TAIR:AT1G08135
    Locus tag
    AT1G08135
    See related
    Araport:AT1G08135
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCHX6B; cation/H+ exchanger 6B
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    Genomic context

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    See CHX6B in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (2548496..2551544, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene TP53-regulating kinase-like protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene DNA ligase 1 Neighboring gene cation/H+ exchanger 6A Neighboring gene Cation/hydrogen exchanger family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cation/H+ exchanger 6B
    NP_849610.2
    • cation/H+ exchanger 6B (CHX6B); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: Cation/hydrogen exchanger family protein (TAIR:AT2G28170.1); Has 1422 Blast hits to 1406 proteins in 439 species: Archae - 64; Bacteria - 709; Metazoa - 0; Fungi - 111; Plants - 510; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      2548496..2551544 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179279.3 → NP_849610.2  cation/H+ exchanger 6B [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849610.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P0CG16
      UniProtKB/TrEMBL
      A0A178WDW5
      Conserved Domains (3) summary
      PLN03159
      Location:57 → 794
      PLN03159; cation/H(+) antiporter 15; Provisional
      cl01133
      Location:65 → 463
      Na_H_Exchanger; Sodium/hydrogen exchanger family
      cl17011
      Location:718 → 770
      Arginase_HDAC; Arginase-like and histone-like hydrolases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0CG16.1

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