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    ATOZI1 monopolar spindle protein (DUF1138) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826213, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATOZI1
    Official Full Name
    monopolar spindle protein (DUF1138)
    Primary source
    TAIR:AT4G00860
    Locus tag
    AT4G00860
    See related
    Araport:AT4G00860
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    Arabidopsis thaliana ozone-induced protein 1; AT0ZI1; T18A10.16; T18A10_16
    Summary
    putative pathogenesis-related protein whose transcript level is induced in response to ozone and pathogenic Pseudomonas strains.
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    Genomic context

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    See ATOZI1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (359223..360505, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene IQ-domain 17 Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene DHHC-type zinc finger family protein Neighboring gene GRF1-interacting factor 3 Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation of a novel Arabidopsis ozone-induced cDNA by differential display. Sharma YK, et al. Plant Mol Biol, 1995 Oct. PMID 7579170
    2. Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. Reumann S, et al. Plant Cell, 2007 Oct. PMID 17951448, Free PMC Article
    3. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
    4. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    5. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_116312.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to bacterium IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to ozone IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to reactive oxygen species IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in mitochondrion HDA PubMed 
    located_in peroxisome HDA PubMed 

    General protein information

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    Preferred Names
    monopolar spindle protein (DUF1138)
    NP_191995.1
    • ATOZI1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to reactive oxygen species, response to bacterium, response to ozone; LOCATED IN: mitochondrion, peroxisome, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT1G01170.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      359223..360505 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116312.3 → NP_191995.1  monopolar spindle protein (DUF1138) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191995.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V0L9, Q38842
      Conserved Domains (1) summary
      pfam06592
      Location:4 → 76
      DUF1138; Protein of unknown function (DUF1138)
    Nucleotide Protein
    Heading Accession and Version

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