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    FAF1 FANTASTIC four-like protein (DUF3049) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828170, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FAF1
    Official Full Name
    FANTASTIC four-like protein (DUF3049)
    Primary source
    TAIR:AT4G02810
    Locus tag
    AT4G02810
    See related
    Araport:AT4G02810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    FANTASTIC FOUR 1; T5J8.13; T5J8_13
    Summary
    A member of the FAF family proteins encoded by the FANTASTIC FOUR (FAF) genes: AT4G02810 (FAF1), AT1G03170 (FAF2), AT5G19260 (FAF3) and AT3G06020 (FAF4). FAFs have the potential to regulate shoot meristem size in Arabidopsis thaliana. FAFs can repress WUS, which ultimately leads to an arrest of meristem activity in FAF overexpressing lines.
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    Genomic context

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    See FAF1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (1256144..1257320)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene GTP-binding family protein Neighboring gene GRIP/coiled-coil protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The FANTASTIC FOUR proteins influence shoot meristem size in Arabidopsis thaliana. Wahl V, et al. BMC Plant Biol, 2010 Dec 22. PMID 21176196, Free PMC Article
    2. Regulation of leaf maturation by chromatin-mediated modulation of cytokinin responses. Efroni I, et al. Dev Cell, 2013 Feb 25. PMID 23449474, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_116515.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    FANTASTIC four-like protein (DUF3049)
    NP_192190.1
    • Protein of unknown function (DUF3049); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT1G03170.1); Has 61763 Blast hits to 21586 proteins in 896 species: Archae - 112; Bacteria - 2155; Metazoa - 26171; Fungi - 6892; Plants - 3461; Viruses - 1647; Other Eukaryotes - 21325 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      1256144..1257320
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116515.4 → NP_192190.1  FANTASTIC four-like protein (DUF3049) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192190.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6NKQ3, Q9SY06
      UniProtKB/TrEMBL
      A0A7G2EY11
      Conserved Domains (1) summary
      pfam11250
      Location:115 → 168
      FAF; Fantastic Four meristem regulator
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SY06.1

    Gene LinkOut

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