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    stress up-regulated Nod 19 protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836304, updated on 18-Sep-2024

    Summary

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    Official Full Name
    stress up-regulated Nod 19 protein
    Primary source
    TAIR:AT5G61820
    Locus tag
    AT5G61820
    See related
    Araport:AT5G61820
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MAC9.6; MAC9_6
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (24834300..24836933, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene calnexin 1 Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene Mitochondrial substrate carrier family protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene tRNA-Tyr Neighboring gene Exostosin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. P1 of turnip mosaic virus interacts with NOD19 for vigorous infection. Bello EO, et al. Front Microbiol, 2023. PMID 37426031, Free PMC Article
    2. An abscisic acid-responsive protein interaction network for sucrose non-fermenting related kinase1 in abiotic stress response. Carianopol CS, et al. Commun Biol, 2020 Mar 26. PMID 32218501, Free PMC Article
    3. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Lumba S, et al. Dev Cell, 2014 May 12. PMID 24823379
    4. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
    5. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001345498.1
    NM_125576.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole HDA PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    stress up-regulated Nod 19 protein
    NP_200990.2
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24834300..24836933 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125576.6 → NP_200990.2  stress up-regulated Nod 19 protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200990.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UNY6, A0A384KNB4, A0A5S9YGE1, Q8RXF7, Q8VZ21
      Conserved Domains (1) summary
      pfam07712
      Location:32 → 417
      SURNod19; Stress up-regulated Nod 19

    2. NM_001345498.1 → NP_001330390.1  stress up-regulated Nod 19 protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UNY6, A0A384KNB4, A0A5S9YGE1, Q8RXF7, Q8VZ21
      Conserved Domains (1) summary
      pfam07712
      Location:32 → 417
      SURNod19; Stress up-regulated Nod 19
    Nucleotide Protein
    Heading Accession and Version

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