Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: Nuclear transport factor 2 (NTF2) family protein
Primary source: TAIR:AT5G04830
Locus tag: AT5G04830
See related: Araport:AT5G04830
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: MUK11.15; MUK11_15
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 5

Exon count:: 7

Sequence:: Chromosome: 5; NC_003076.8 (1401983..1404136, complement)

Chromosome 5 - NC_003076.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_120565.3

Supported by ESTs:

NM_180435.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in nucleus	ISM Inferred from Sequence Model more info
located_in plasma membrane	HDA more info	PubMed

General protein information

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Preferred Names: Nuclear transport factor 2 (NTF2) family protein

NP_568142.1

Nuclear transport factor 2 (NTF2) family protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NP_850766.1

Nuclear transport factor 2 (NTF2) family protein; Has 83 Blast hits to 83 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 4; Fungi - 37; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003076.8 Reference assembly

Range

1401983..1404136 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_180435.4 → NP_850766.1 Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_850766.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A178UR99, Q9FMC7

Conserved Domains (1) summary

cl09109
Location:43 → 139

NTF2_like; Nuclear transport factor 2 (NTF2-like) superfamily. This family includes members of the NTF2 family, Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases, and the beta subunit of Ring hydroxylating dioxygenases. This family is a classic example of ...
NM_120565.3 → NP_568142.1 Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_568142.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A178UR99, Q9FMC7

Conserved Domains (1) summary

cl09109
Location:43 → 139

NTF2_like; Nuclear transport factor 2 (NTF2-like) superfamily. This family includes members of the NTF2 family, Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases, and the beta subunit of Ring hydroxylating dioxygenases. This family is a classic example of ...