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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086019.1 Reference GRCr8
- Range
-
143819072..143905300 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_039101057.2 → XP_038956985.1 recQ-like DNA helicase BLM isoform X3
- UniProtKB/TrEMBL
-
D3ZQW1
- Conserved Domains (5) summary
-
- smart00341
Location:1201 → 1281
- HRDC; Helicase and RNase D C-terminal
- TIGR00614
Location:649 → 1132
- recQ_fam; ATP-dependent DNA helicase, RecQ family
- pfam08072
Location:362 → 401
- BDHCT; BDHCT (NUC031) domain
- pfam16202
Location:1 → 356
- BLM_N; N-terminal region of Bloom syndrome protein
- pfam16204
Location:415 → 639
- BDHCT_assoc; BDHCT-box associated domain on Bloom syndrome protein
-
XM_063262635.1 → XP_063118705.1 recQ-like DNA helicase BLM isoform X1
- UniProtKB/TrEMBL
-
D3ZQW1
-
XM_039101056.2 → XP_038956984.1 recQ-like DNA helicase BLM isoform X2
- UniProtKB/TrEMBL
-
D3ZQW1
- Conserved Domains (5) summary
-
- smart00341
Location:1209 → 1289
- HRDC; Helicase and RNase D C-terminal
- TIGR00614
Location:657 → 1140
- recQ_fam; ATP-dependent DNA helicase, RecQ family
- pfam08072
Location:370 → 409
- BDHCT; BDHCT (NUC031) domain
- pfam16202
Location:10 → 364
- BLM_N; N-terminal region of Bloom syndrome protein
- pfam16204
Location:423 → 647
- BDHCT_assoc; BDHCT-box associated domain on Bloom syndrome protein
-
XM_006229458.5 → XP_006229520.1 recQ-like DNA helicase BLM isoform X4
- UniProtKB/TrEMBL
-
D3ZQW1
- Conserved Domains (9) summary
-
- smart00341
Location:1210 → 1290
- HRDC; Helicase and RNase D C-terminal
- TIGR00614
Location:658 → 1141
- recQ_fam; ATP-dependent DNA helicase, RecQ family
- smart00956
Location:1077 → 1179
- RQC; This DNA-binding domain is found in the RecQ helicase among others and has a helix-turn-helix structure
- cd00079
Location:862 → 993
- HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
- pfam00270
Location:670 → 842
- DEAD; DEAD/DEAH box helicase
- pfam08072
Location:371 → 408
- BDHCT; BDHCT (NUC031) domain
- pfam16124
Location:998 → 1067
- RecQ_Zn_bind; RecQ zinc-binding
- pfam16202
Location:10 → 365
- BLM_N; N-terminal region of Bloom syndrome protein
- pfam16204
Location:424 → 648
- BDHCT_assoc; BDHCT-box associated domain on Bloom syndrome protein
-
XM_063262640.1 → XP_063118710.1 recQ-like DNA helicase BLM isoform X5
- UniProtKB/TrEMBL
-
D3ZQW1
- Related
- ENSRNOP00000015065.9, ENSRNOT00000015065.9
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001107526.1: Suppressed sequence
- Description
- NM_001107526.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.